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VIMS 2017 Journal Articles

An alphabetical list of the 134 journal articles authored or co-authored by researchers at the Virginia Institute of Marine Science during 2017, as compiled by Thomson Reuters' Web of Science©.

  1. Abdelrahman, H., et al., 2017. Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research (vol 18, 191, 2017). Bmc Genomics, 18. ARTN 235 https://doi.org/10.1186/s12864-017-3614-9
  2. Ailloud, L.E., et al., 2017. Improving growth estimates for Western Atlantic bluefin tuna using an integrated modeling approach. Fisheries Research, 191: p. 17-24. https://doi.org/10.1016/j.fishres.2017.02.013
  3. Albouy, C., et al., 2017. Multifaceted biodiversity hotspots of marine mammals for conservation priorities. Diversity and Distributions, 23(6): p. 615-626. 10.1111/ddi.12556
  4. Allgood, J.M., et al., 2017. Potential human exposure to halogenated flame-retardants in elevated surface dust and floor dust in an academic environment. Environmental Research, 153: p. 55-62. https://doi.org/10.1016/j.envres.2016.11.010
  5. Altieri, A.H., et al., 2017. Tropical dead zones and mass mortalities on coral reefs. Proceedings of the National Academy of Sciences of the United States of America, 114(14): p. 3660-3665. https://doi.org/10.1073/pnas.1621517114
  6. Arfken, A., et al., 2017. Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach. Plos One, 12(9). ARTN e0185071 https://doi.org/10.1371/journal.pone.0185071
  7. Atkinson, A., et al., 2017. KRILLBASE: a circumpolar database of Antarctic krill and salp numerical densities, 1926-2016. Earth System Science Data, 9(1): p. 193-210. https://doi.org/10.5194/essd-9-193-2017
  8. Baer, S.E., et al., 2017. Seasonal nitrogen uptake and regeneration in the western coastal Arctic. Limnology and Oceanography, 62(6): p. 2463-2479. https://doi.org/10.1002/lno.10580
  9. Banha, F., et al., 2017. Forensic reconstruction of Ictalurus punctatus invasion routes using on-line fishermen records. Knowledge and Management of Aquatic Ecosystems, (418). ARTN 56 https://doi.org/10.1051/kmae/2017045
  10. Bilkovic, D.M., et al., 2017. Mutualism between ribbed mussels and cordgrass enhances salt marsh nitrogen removal. Ecosphere, 8(4). ARTN e01795 https://doi.org/10.1002/ecs2.1795
  11. Breyta, R., et al., 2017. Transmission routes maintaining a viral pathogen of steelhead trout within a complex multi-host assemblage. Ecology and Evolution, 7(20): p. 8187-8200. https://doi.org/10.1002/ece3.3276
  12. Bulluck, L.P., et al., 2017. Feather carotenoid content is correlated with reproductive success and provisioning rate in female Prothonotary Warblers. Auk, 134(1): p. 229-239. https://doi.org/10.1642/Auk-16-151.1
  13. Cai, W.J., et al., 2017. Redox reactions and weak buffering capacity lead to acidification in the Chesapeake Bay. Nature Communications, 8. ARTN 369 https://doi.org/10.1038/s41467-017-00417-7
  14. Carnegie, R.B., et al., 2017. HONORED LIFE MEMBER Eugene M. Burreson March 25, 2009. Journal of Shellfish Research, 36(1): p. 1-2. https://doi.org/10.2983/035.036.0101
  15. Chao, Y., et al., 2017. The origins of the anomalous warming in the California coastal ocean and San Francisco Bay during 2014-2016. Journal of Geophysical Research-Oceans, 122(9): p. 7537-7557. https://doi.org/10.1002/2017jc013120
  16. Chao, Y., et al., 2017. Development, implementation, and validation of a modeling system for the San Francisco Bay and Estuary. Estuarine Coastal and Shelf Science, 194: p. 40-56. https://doi.org/10.1016/j.ecss.2017.06.005
  17. Colden, A.M., R.J. Latour, and R.N. Lipcius, 2017. Reef height drives threshold dynamics of restored oyster reefs. Marine Ecology Progress Series, 582: p. 1-13. https://doi.org/10.3354/meps12362
  18. Coleman, D.J., A.S. Kolker, and K.H. Johannesson, 2017. Submarine groundwater discharge and alkaline earth element dynamics in a deltaic coastal setting. Hydrology Research, 48(5): p. 1169-1176. https://doi.org/10.2166/nh.2016.285
  19. Corso, A.D., et al., 2017. Experiments with By-Catch Reduction Devices to Exclude Diamondback Terrapins and Retain Blue Crabs. Estuaries and Coasts, 40(5): p. 1516-1522. https://doi.org/10.1007/s12237-017-0223-4
  20. Crosswell, J.R., et al., 2017. Carbon budget of a shallow, lagoonal estuary: Transformations and source-sink dynamics along the river-estuary-ocean continuum. Limnology and Oceanography, 62: p. S29-S45. https://doi.org/10.1002/lno.10631
  21. Deary, A.L. and E.J. Hilton, 2017. Influence of cladogenesis on feeding structures in drums (Teleostei: Sciaenidae). Zoology, 120: p. 53-61. https://doi.org/10.1016/j.zool.2016.08.004
  22. Deary, A.L., R.J. Latour, and E.J. Hilton, 2017. Niche Partitioning in Early Life History Stage, Estuarine-Dependent Fishes (Sciaenidae). Estuaries and Coasts, 40(6): p. 1757-1770. https://doi.org/10.1007/s12237-017-0248-8
  23. Deaton, C.D., C.J. Hein, and M.L. Kirwan, 2017. Barrier island migration dominates ecogeomorphic feedbacks and drives salt marsh loss along the Virginia Atlantic Coast, USA. Geology, 45(2): p. 123-126. https://doi.org/10.1130/G38459.1
  24. Dell'Apa, A., M.G. Pennino, and C. Bonzek, 2017. Modeling the habitat distribution of spiny dogfish (Squalus acanthias), by sex, in coastal waters of the northeastern United States. Fishery Bulletin, 115(1): p. 89-100. https://doi.org/10.7755/Fb.115.1.8
  25. DePiper, G.S., D.W. Lipton, and R.N. Lipcius, 2017. Valuing Ecosystem Services: Oysters, Denitrification, and Nutrient Trading Programs. Marine Resource Economics, 32(1): p. 1-20. https://doi.org/10.1086/688976
  26. Doumayrou, J., et al., 2017. Quantification of Pea enation mosaic virus 1 and 2 Pisum sativum by one step real-time RT-PCR. Journal of Virological Methods, 240: p. 63-68. https://doi.org/10.1016/j.jviromet.2016.11.013
  27. Du, J.B., et al., 2017. A Numerical Modeling Approach to Predict the Effect of a Storm Surge Barrier on Hydrodynamics and Long-Term Transport Processes in a Partially Mixed Estuary. Estuaries and Coasts, 40(2): p. 387-403. https://doi.org/10.1007/s12237-016-0175-0
  28. Fisher, R.A. and D.B. Rudders, 2017. Population and Reproductive Biology of the Channeled Whelk, Busycotypus Canaliculatus, in the Us Mid-Atlantic. Journal of Shellfish Research, 36(2): p. 427-444. https://doi.org/10.2983/035.036.0215
  29. Ganju, N.K., et al., 2017. Spatially integrative metrics reveal hidden vulnerability of microtidal salt marshes. Nature Communications, 8. ARTN 14156 https://doi.org/10.1038/ncomms14156
  30. Glaspie, C.N., K. Longmire, and R.D. Seitz, 2017. Acidification alters predator-prey interactions of blue crab Callinectes sapidus and soft-shell clam Mya arenaria. Journal of Experimental Marine Biology and Ecology, 489: p. 58-65. https://doi.org/10.1016/j.jembe.2016.11.010
  31. Glaspie, C.N. and R.D. Seitz, 2017. Role of habitat and predators in maintaining functional diversity of estuarine bivalves. Marine Ecology Progress Series, 570: p. 113-125. https://doi.org/10.3354/meps12103
  32. Glaspie, C.N. and R.D. Seitz, 2017. Multiple stressors associated with acid sulfate soil effluent influence mud crab Scylla serrata predation on Sydney rock oysters Saccostrea glomerata. Marine and Freshwater Research, 68(4): p. 743-751. https://doi.org/10.1071/Mf15350
  33. Guevelou, E., J.L. Matt, and S.K. Allen, 2017. Glycogen Concentration in Freeze-Dried Tissues of Eastern Oyster (Crassostrea Virginica) Using near Infrared Reflectance Spectroscopy to Determine the Relationship between Concentrations of the Tissues Excised for Histological Sampling and the Remaining Tissues. Journal of Shellfish Research, 36(2): p. 325-333. https://doi.org/10.2983/035.036.0204
  34. Hale, R.C., 2017. Analytical challenges associated with the determination of microplastics in the environment. Analytical Methods, 9(9): p. 1326-1327. https://doi.org/10.1039/c7ay90015e
  35. Harding, J.M., et al., 2017. Sex and site-specific trends in veined rapa whelk (Rapana venosa) tributyltin bioaccumulation: considerations for biomonitoring. Journal of the Marine Biological Association of the United Kingdom, 97(7): p. 1495-1504. https://doi.org/10.1017/S0025315416000849
  36. Hartzell, S.E., et al., 2017. Effects-based spatial assessment of contaminated estuarine sediments from Bear Creek, Baltimore Harbor, MD, USA. Environmental Science and Pollution Research, 24(28): p. 22158-22172. https://doi.org/10.1007/s11356-017-9667-0
  37. Hein, C.J., et al., 2017. Post-glacial climate forcing of surface processes in the Ganges-Brahmaputra river basin and implications for carbon sequestration. Earth and Planetary Science Letters, 478: p. 89-101. https://doi.org/10.1016/j.epsl.2017.08.013
  38. Hidalgo, M., et al., 2017. Advancing the link between ocean connectivity, ecological function and management challenges. Ices Journal of Marine Science, 74(6): p. 1702-1707. https://doi.org/10.1093/icesjms/fsx112
  39. Hobday, A.J., et al., 2017. International collaboration and comparative research on ocean top predators under CLIOTOP. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 140: p. 1-8. https://doi.org/10.1016/j.dsr2.2017.03.008
  40. Hoenig, J.M., 2017. Should Natural Mortality Estimators Based on Maximum Age Also Consider Sample Size? Transactions of the American Fisheries Society, 146(1): p. 136-146. https://doi.org/10.1080/00028487.2016.1249291
  41. Hoenig, J.M., et al., 2017. Impact of disease on the survival of three commercially fished species. Ecological Applications, 27(7): p. 2116-2127. https://doi.org/10.1002/eap.1595/full
  42. Huchin-Mian, J.P., H.J. Small, and J.D. Shields, 2017. Patterns in the natural transmission of the parasitic dinoflagellate Hematodinium perezi in American blue crabs, Callinectes sapidus from a highly endemic area. Marine Biology, 164(7). ARTN 153 https://doi.org/10.1007/s00227-017-3185-y
  43. Huynh, Q.C., et al., 2017. Multispecies Extensions to a Nonequilibrium Length-Based Mortality Estimator. Marine and Coastal Fisheries, 9(1): p. 68-78. https://doi.org/10.1080/19425120.2016.1259696
  44. Huynh, Q.C., et al., 2017. Estimating Total Mortality Rates from Mean Lengths and Catch Rates in Nonequilibrium Situations. Transactions of the American Fisheries Society, 146(4): p. 803-815. https://doi.org/10.1080/00028487.2017.1308881
  45. Iturralde-Polit, P., et al., 2017. The effects of climate change on a mega-diverse country: predicted shifts in mammalian species richness and turnover in continental Ecuador. Biotropica, 49(6): p. 821-831. https://doi.org/10.1111/btp.12467
  46. Johnson, A.J., K.A. Moore, and R.J. Orth, 2017. The influence of resource availability on flowering intensity in Zostera marina (L.). Journal of Experimental Marine Biology and Ecology, 490: p. 13-22. https://doi.org/10.1016/j.jembe.2017.02.002
  47. Johnson, D.S. and R. Heard, 2017. Bottom-up control of parasites. Ecosphere, 8(10). ARTN e01885 https://doi.org/10.1002/ecs2.1885
  48. Johnson, D.S. and B.L. Williams, 2017. Sea level rise may increase extinction risk of a saltmarsh ontogenetic habitat specialist. Ecology and Evolution, 7(19): p. 7786-7795. https://doi.org/10.1002/ece3.3291
  49. Jones, R.M. and W.O. Smith, 2017. The influence of short-term events on the hydrographic and biological structure of the southwestern Ross Sea. Journal of Marine Systems, 166: p. 184-195. https://doi.org/10.1016/j.jmarsys.2016.09.006
  50. Kaplan, D.M., et al., 2017. Uncertainty in empirical estimates of marine larval connectivity. Ices Journal of Marine Science, 74(6): p. 1723-1734. https://doi.org/10.1093/icesjms/fsw182
  51. Kaufman, D.E., et al., 2017. Climate change impacts on southern Ross Sea phytoplankton composition, productivity, and export. Journal of Geophysical Research-Oceans, 122(3): p. 2339-2359. https://doi.org/10.1002/2016jc012514
  52. Kendrick, G.A., et al., 2017. Demographic and genetic connectivity: the role and consequences of reproduction, dispersal and recruitment in seagrasses. Biological Reviews, 92(2): p. 921-938. 10.1111/brv.12261
  53. Kirwan, M.L., et al., 2017. Reply to 'Marsh vulnerability to sea-level rise'. Nature Climate Change, 7(11): p. 756-757.
  54. Konstantinidis, P., et al., 2017. Rediscovery of oxudercine type specimens (Teleostei: Gobiidae) assumed destroyed during World War II. Ichthyological Research, 64(1): p. 123-130. https://doi.org/10.1007/s10228-016-0532-9
  55. Kornis, M.S., et al., 2017. Linking the Abundance of Estuarine Fish and Crustaceans in Nearshore Waters to Shoreline Hardening and Land Cover. Estuaries and Coasts, 40(5): p. 1464-1486. https://doi.org/10.1007/s12237-017-0213-6
  56. Kovalchuk, O.M. and E.J. Hilton, 2017. Neogene and Pleistocene Sturgeon (Acipenseriformes, Acipenseridae) Remains from Southeastern Europe. Journal of Vertebrate Paleontology, 37(5). ARTN e1362644 https://doi.org/10.1080/02724634.2017.1362644
  57. Krauss, K.W., et al., 2017. Created mangrove wetlands store belowground carbon and surface elevation change enables them to adjust to sea-level rise. Scientific Reports, 7. ARTN 1030 https://doi.org/10.1038/s41598-017-01224-2
  58. Kuehl, S.A., et al., 2017. Recent paleoseismicity record in Prince William Sound, Alaska, USA. Geo-Marine Letters, 37(6): p. 527-536. https://doi.org/10.1007/s00367-017-0505-7
  59. La Guardia, M.J., et al., 2017. Human Indoor Exposure to Airborne Halogenated Flame Retardants: Influence of Airborne Particle Size. International Journal of Environmental Research and Public Health, 14(5). ARTN 507 https://doi.org/10.3390/ijerph14050507
  60. Larsen, J., et al., 2017. Characterization of the functional and anatomical differences in the atrial and ventricular myocardium from three species of elasmobranch fishes: smooth dogfish (Mustelus canis), sandbar shark (Carcharhinus plumbeus), and clearnose skate (Raja eglanteria). Journal of Comparative Physiology B-Biochemical Systemic and Environmental Physiology, 187(2): p. 291-313. https://doi.org/10.1007/s00360-016-1034-9
  61. Lefcheck, J.S., S.R. Marion, and R.J. Orth, 2017. Restored Eelgrass (Zostera marina L.) as a Refuge for Epifaunal Biodiversity in Mid-Western Atlantic Coastal Bays. Estuaries and Coasts, 40(1): p. 200-212. https://doi.org/10.1007/s12237-016-0141-x
  62. Lefcheck, J.S., et al., 2017. Multiple stressors threaten the imperiled coastal foundation species eelgrass (Zostera marina) in Chesapeake Bay, USA. Glob Chang Biol. https://doi.org/10.1111/gcb.13623
  63. Li, C.G. and J.P.Y. Maa, 2017. Multi-relaxation-time lattice Boltzmann simulations of lid driven flows using graphics processing unit. Applied Mathematics and Mechanics-English Edition, 38(5): p. 707-722. https://doi.org/10.1007/s10483-017-2194-9
  64. Li, C.G. and J.P.Y. Maa, 2017. Lattice Boltzmann simulations of three-dimensional incompressible flows in a four-sided lid driven cavity. Fluid Dynamics Research, 49(2). ARTN 025507 https://doi.org/10.1088/1873-7005/aa5658
  65. Loose, E.L., E.J. Hilton, and J.E. Graves, 2017. Comparative morphology of the scales of roundscale spearfish Tetrapturus georgii and white marlin Kajikia albida. Journal of Fish Biology, 90(4): p. 1548-1569. 10.1111/jfb.13248
  66. Loyal, C.D., R.D. Seitz, and K.E. Knick, 2017. Direct and indirect impacts of shoreline development on shallow-water benthic communities in a depauperate estuarine system. Bulletin of Marine Science, 93(3): p. 715-741. https://doi.org/10.5343/bms.2016.1076
  67. Luek, J.L., et al., 2017. Persistent organic pollutants in the Atlantic and southern oceans and oceanic atmosphere. Science of the Total Environment, 583: p. 64-71. https://doi.org/10.1016/j.scitotenv.2016.12.189
  68. Lynch, S.D., et al., 2017. The effects of pop-up satellite archival tags (PSATs) on the metabolic rate and swimming kinematics of juvenile sandbar shark Carcharhinus plumbeus. Fisheries Research, 186: p. 205-215. https://doi.org/10.1016/j.fishres.2016.08.013
  69. Lynett, P.J., et al., 2017. Inter-model analysis of tsunami-induced coastal currents. Ocean Modelling, 114: p. 14-32. https://doi.org/10.1016/j.ocemod.2017.04.003
  70. Madigan, D.J., et al., 2017. Assessing Fukushima-Derived Radiocesium in Migratory Pacific Predators. Environmental Science & Technology, 51(16): p. 8962-8971. https://doi.org/10.1021/acs.est.7b00680
  71. Manno, C., et al., 2017. Shelled pteropods in peril: Assessing vulnerability in a high CO2 ocean. Earth-Science Reviews, 169: p. 132-145. https://doi.org/10.1016/j.earscirev.2017.04.005
  72. Maufroy, A., et al., 2017. Massive increase in the use of drifting Fish Aggregating Devices (dFADs) by tropical tuna purse seine fisheries in the Atlantic and Indian oceans. Ices Journal of Marine Science, 74(1): p. 215-225. https://doi.org/10.1093/icesjms/fsw175
  73. McDevitt, J.P., et al., 2017. Addressing the Issue of Microplastics in the Wake of the Microbead-Free Waters Act-A New Standard Can Facilitate Improved Policy. Environmental Science & Technology, 51(12): p. 6611-6617. https://doi.org/10.1021/acs.est.6b05812
  74. Meynard, C.N., et al., 2017. Climate-driven geographic distribution of the desert locust during recession periods: Subspecies' niche differentiation and relative risks under scenarios of climate change. Global Change Biology, 23(11): p. 4739-4749. https://doi.org/10.1111/gcb.13739
  75. Milliman, J.D., et al., 2017. Impact of catastrophic events on small mountainous rivers: Temporal and spatial variations in suspendedand dissolved-solid fluxes along the Choshui River, central western Taiwan, during typhoon Mindulle, July 2-6, 2004. Geochimica Et Cosmochimica Acta, 205: p. 272-294. https://doi.org/10.1016/j.gca.2017.02.015
  76. Mislan, K.A.S., et al., 2017. Projections of climate-driven changes in tuna vertical habitat based on species-specific differences in blood oxygen affinity. Global Change Biology, 23(10): p. 4019-4028. https://doi.org/10.1111/gcb.13799
  77. Moriarty, J.M., et al., 2017. The roles of resuspension, diffusion and biogeochemical processes on oxygen dynamics offshore of the Rhone River, France: a numerical modeling study. Biogeosciences, 14(7): p. 1919-1946. https://doi.org/10.5194/bg-14-1919-2017
  78. Mosby, A.F. and W.O. Smith, 2017. Structural equation modeling of the influence of environmental factors on summer phytoplankton growth in the Ross Sea. Polar Biology, 40(2): p. 291-299. https://doi.org/10.1007/s00300-016-1953-7
  79. Mullon, C., et al., 2017. Exploring future scenarios for the global supply chain of tuna. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 140: p. 251-267. https://doi.org/10.1016/j.dsr2.2016.08.004
  80. Nomura, K.J., et al., 2017. Comparative analysis of factors influencing spatial distributions of marine protected areas and territorial use rights for fisheries in Japan. Marine Policy, 82: p. 59-67. https://doi.org/10.1016/j.marpol.2017.05.005
  81. O'Leary, P.A. and O.J. Pung, 2017. Behavioral analysis of Microphallus turgidus cercariae in relation to microhabitat of two host grass shrimp species (Palaemonetes spp.). Diseases of Aquatic Organisms, 122(3): p. 237-245. https://doi.org/10.3354/dao03075
  82. O'Leary, P.A. and J.D. Shields, 2017. Fiddler crabs (Uca spp.) as model hosts for laboratory infections of Hematodinium perezi. Journal of Invertebrate Pathology, 143: p. 11-17. https://doi.org/10.1016/j.jip.2016.11.005
  83. Omori, K.L. and R.A. Fisher, 2017. Summer and fall movement of cownose ray, Rhinoptera bonasus, along the east coast of United States observed with pop-up satellite tags. Environmental Biology of Fishes, 100(11): p. 1435-1449. https://doi.org/10.1007/s10641-017-0654-6
  84. Oreska, M.P.J., et al., 2017. The bay scallop (Argopecten irradians) industry collapse in Virginia and its implications for the successful management of scallop-seagrass habitats. Marine Policy, 75: p. 116-124. https://doi.org/10.1016/j.marpol.2016.10.021
  85. Orth, R.J., et al., 2017. Submersed Aquatic Vegetation in Chesapeake Bay: Sentinel Species in a Changing World. Bioscience, 67(8): p. 698-712. https://doi.org/10.1093/biosci/bix058
  86. Orth, R.J., J.S. Lefcheck, and D.J. Wilcox, 2017. Boat Propeller Scarring of Seagrass Beds in Lower Chesapeake Bay, USA: Patterns, Causes, Recovery, and Management. Estuaries and Coasts, 40(6): p. 1666-1676. https://doi.org/10.1007/s12237-017-0239-9
  87. Pace, S.M., et al., 2017. Development of an Age-Frequency Distribution for Ocean Quahogs (Arctica Islandica) on Georges Bank. Journal of Shellfish Research, 36(1): p. 41-53. https://doi.org/10.2983/035.036.0106
  88. Pahtz, T. and O. Duran, 2017. Fluid forces or impacts: What governs the entrainment of soil particles in sediment transport mediated by a Newtonian fluid? Physical Review Fluids, 2(7). ARTN 074303 https://doi.org/10.1103/PhysRevFluids.2.074303
  89. Peterson, C.D., et al., 2017. Preliminary recovery of coastal sharks in the south-east UnitedStates. Fish and Fisheries, 18(5): p. 845-859. https://doi.org/10.1111/faf.12210
  90. Peterson, C.D., J. Gartland, and R.J. Latour, 2017. Novel use of hook timers to quantify changing catchability over soak time in longline surveys. Fisheries Research, 194: p. 99-111. https://doi.org/10.1016/j.fishres.2017.05.010
  91. Pondell, C.R. and E.A. Canuel, 2017. The role of hydrodynamic sorting on the accumulation and distribution of organic carbon in an impoundment: Englebright Lake, California, USA. Biogeochemistry, 133(2): p. 129-145. https://doi.org/10.1007/s10533-017-0319-8
  92. Powell, E.N., et al., 2017. Can we estimate molluscan abundance and biomass on the continental shelf? Estuarine Coastal and Shelf Science, 198: p. 213-224. https://doi.org/10.1016/j.ecss.2017.09.012
  93. Priest, G.R., et al., 2017. New constraints on coseismic slip during southern Cascadia subduction zone earthquakes over the past 4600 years implied by tsunami deposits and marine turbidites. Natural Hazards, 88(1): p. 285-313. https://doi.org/10.1007/s11069-017-2864-9
  94. Qin, Q.B. and J. Shen, 2017. The contribution of local and transport processes to phytoplankton biomass variability over different timescales in the Upper James River, Virginia. Estuarine Coastal and Shelf Science, 196: p. 123-133. https://doi.org/10.1016/j.ecss.2017.06.037
  95. Quattrini, A.M., et al., 2017. Demersal fish assemblages on seamounts and other rugged features in the northeastern Caribbean. Deep-Sea Research Part I-Oceanographic Research Papers, 123: p. 90-104. https://doi.org/10.1016/j.dsr.2017.03.009
  96. Rao, V.P. and J.D. Milliman, 2017. Relict ooids off northwestern India: Inferences on their genesis and late Quaternary sea level. Sedimentary Geology, 358: p. 44-50. https://doi.org/10.1016/j.sedgeo.2017.06.004
  97. Reece, K.S., et al., 2017. A novel monoclonal Perkinsus chesapeaki in vitro isolate from an Australian cockle, Anadara trapezia. Journal of Invertebrate Pathology, 148: p. 86-93. https://doi.org/10.1016/j.jip.2017.05.007
  98. Renni, S.E., A. Brandt, and C.T. Friedrichs, 2017. Initiation of motion and scour burial of objects underwater. Ocean Engineering, 131: p. 282-294. https://doi.org/10.1016/j.oceaneng.2016.12.029
  99. Reynolds, P.L., et al., 2017. Ghost of invasion past: legacy effects on community disassembly following eradication of an invasive ecosystem engineer. Ecosphere, 8(3). ARTN e01711 https://doi.org/10.1002/ecs2.1711
  100. Ricci, S.W., et al., 2017. Oyster toadfish (Opsanus tau) boatwhistle call detection and patterns within a large-scale oyster restoration site. Plos One, 12(8). ARTN e0182757 https://doi.org/10.1371/journal.pone.0182757
  101. Rivest, E.B., et al., 2017. Lipid consumption in coral larvae differs among sites: a consideration of environmental history in a global ocean change scenario. Proceedings of the Royal Society B-Biological Sciences, 284(1853). ARTN 20162825 https://doi.org/10.1098/rspb.2016.2825
  102. Ryan-Keogh, T.J., et al., 2017. Temporal progression of photosynthetic-strategy in phytoplankton in the Ross Sea, Antarctica. Journal of Marine Systems, 166: p. 87-96. https://doi.org/10.1016/j.jmarsys.2016.08.014
  103. Scavia, D., et al., 2017. Ensemble modeling informs hypoxia management in the northern Gulf of Mexico. Proceedings of the National Academy of Sciences of the United States of America, 114(33): p. 8823-8828. https://doi.org/10.1073/pnas.1705293114
  104. Scheld, A.M. and C.M. Anderson, 2017. Selective fishing and shifting production in multispecies fisheries. Canadian Journal of Fisheries and Aquatic Sciences, 74(3): p. 388-395. https://doi.org/10.1139/cjfas-2015-0494
  105. Schepers, L., et al., 2017. Spatio-temporal development of vegetation die-off in a submerging coastal marsh. Limnology and Oceanography, 62(1): p. 137-150. https://doi.org/10.1002/lno.10381
  106. Schloesser, R.W. and M.C. Fabrizio, 2017. Condition Indices as Surrogates of Energy Density and Lipid Content in Juveniles of Three Fish Species. Transactions of the American Fisheries Society, 146(5): p. 1058-1069. https://doi.org/10.1080/00028487.2017.1324523
  107. Seitz, R.D., R.N. Lipcius, and A.H. Hines, 2017. Consumer versus resource control and the importance of habitat heterogeneity for estuarine bivalves. Oikos, 126(1): p. 121-135. https://doi.org/10.1111/oik.03330
  108. Shadwick, E.H., B. Tilbrook, and K.I. Currie, 2017. Late-summer biogeochemistry in the Mertz Polynya: East Antarctica. Journal of Geophysical Research-Oceans, 122(9): p. 7380-7394. https://doi.org/10.1002/2017jc013015
  109. Shao, Y.Y., et al., 2017. Simulating high ebb currents in the North Passage of the Yangtze estuary using a vertical 1-D model. Estuarine Coastal and Shelf Science, 196: p. 399-410. https://doi.org/10.1016/j.ecss.2017.08.001
  110. Shen, X.T. and J.P.Y. Maa, 2017. Floc size distributions of suspended kaolinite in an advection transport dominated tank: measurements and modeling. Ocean Dynamics, 67(11): p. 1495-1510. https://doi.org/10.1007/s10236-017-1097-5
  111. Shields, J.D., 2017. Collection techniques for the analyses of pathogens in crustaceans. Journal of Crustacean Biology, 37(6): p. 753-763. https://doi.org/10.1093/jcbiol/rux077
  112. Shields, J.D., et al., 2017. New insight into transmission dynamics of the crustacean pathogen Hematodinium perezi (Dinoflagellata) using a novel sentinel methodology. Marine Ecology Progress Series, 573: p. 73-84. https://doi.org/10.3354/meps12175
  113. Silva, C., et al., 2017. Infection of the lesser spotted dogfish with Proleptus obtusus Dujardin, 1845 (Nematoda: Spirurida) reflects ontogenetic feeding behaviour and seasonal differences in prey availability. Acta Parasitologica, 62(2): p. 471-476. https://doi.org/10.1515/ap-2017-0055
  114. Sipler, R.E., et al., 2017. Chemical and photophysiological impact of terrestrially-derived dissolved organic matter on nitrate uptake in the coastal western Arctic. Limnology and Oceanography, 62(5): p. 1881-1894. https://doi.org/10.1002/lno.10541
  115. Sipler, R.E., et al., 2017. Microbial Community Response to Terrestrially Derived Dissolved Organic Matter in the Coastal Arctic. Frontiers in Microbiology, 8. ARTN 1018 https://doi.org/10.3389/fmicb.2017.01018
  116. Smith, W.O., et al., 2017. Mesoscale variability in intact and ghost colonies of Phaeocystis antarctica in the Ross Sea: Distribution and abundance. Journal of Marine Systems, 166: p. 97-107. https://doi.org/10.1016/j.jmarsys.2016.05.007
  117. Southworth, M., M.C. Long, and R. Mann, 2017. Oyster (Crassostrea Virginica [Gmelin, 1791]) Mortality at Prolonged Exposures to High Temperature and Low Salinity. Journal of Shellfish Research, 36(2): p. 335-340. https://doi.org/10.2983/035.036.0205
  118. Spackeen, J.L., et al., 2017. Interactive effects of elevated temperature and CO2 on nitrate, urea, and dissolved inorganic carbon uptake by a coastal California, USA, microbial community. Marine Ecology Progress Series, 577: p. 49-65. https://doi.org/10.3354/meps12243
  119. Steinberg, D.K. and M.R. Landry, 2017. Zooplankton and the Ocean Carbon Cycle. Annual Review of Marine Sciences, Vol 9, 9: p. 413-444. https://doi.org/10.1146/annurev-marine-010814-015924
  120. Stuart-Smith, R.D., et al., 2017. Assessing National Biodiversity Trends for Rocky and Coral Reefs through the Integration of Citizen Science and Scientific Monitoring Programs (vol 67, pg 134, 2017). Bioscience, 67(8): p. 773-773. https://doi.org/10.1093/biosci/bix070
  121. Tozzi, S. and W.O. Smith, 2017. Contrasting Photo-physiological Responses of the Haptophyte Phaeocystis Antarctica and the Diatom Pseudonitzschia sp. in the Ross Sea (Antarctica). Aims Geosciences, 3(2): p. 142-162. https://doi.org/10.3934/geosci.2017.2.142
  122. Tuckey, T.D., et al., 2017. Low Apparent Survival and Heterogeneous Movement Patterns of Invasive Blue Catfish in a Coastal River. Marine and Coastal Fisheries, 9(1): p. 564-572. https://doi.org/10.1080/19425120.2017.1381207
  123. Turner, J.S., J.L. Pretty, and A.M.P. McDonnell, 2017. Marine particles in the Gulf of Alaska shelf system: Spatial patterns and size distributions from in situ optics. Continental Shelf Research, 145: p. 13-20. https://doi.org/10.1016/j.csr.2017.07.002
  124. van Belzen, J., et al., 2017. Vegetation recovery in tidal marshes reveals critical slowing down under increased inundation. Nature Communications, 8. ARTN 15811 https://doi.org/10.1038/ncomms15811
  125. Vandersea, M.W., et al., 2017. qPCR assays for Alexandrium fundyense and A. ostenfeldii (Dinophyceae) identified from Alaskan waters and a review of species-specific Alexandrium molecular assays. Phycologia, 56(3): p. 303-320. https://doi.org/10.2216/16-41.1
  126. Vaz, D.F.B., A.P. Summers, and E.J. Hilton, 2017. Systematic Inferences of the Post-Cranial Skeleton of Batrachoiformes. Integrative and Comparative Biology, 57: p. E437-E437.
  127. Verissimo, A., et al., 2017. Molecular diversity and distribution of eastern Atlantic and Mediterranean dogfishes Squalus highlight taxonomic issues in the genus. Zoologica Scripta, 46(4): p. 414-428. https://doi.org/10.1111/zsc.12224
  128. Verissmo, A., et al., 2017. World without borders-genetic population structure of a highly migratory marine predator, the blue shark (Prionace glauca). Ecology and Evolution, 7(13): p. 4768-4781. https://doi.org/10.1002/ece3.2987
  129. Vignier, J., et al., 2017. Sensitivity of eastern oyster (Crassostrea virginica) spermatozoa and oocytes to dispersed oil: Cellular responses and impacts on fertilization and embryogenesis. Environmental Pollution, 225: p. 270-282. https://doi.org/10.1016/j.envpol.2016.11.052
  130. Wargo, A.R., et al., 2017. Replication and shedding kinetics of infectious hematopoietic necrosis virus in juvenile rainbow trout. Virus Research, 227: p. 200-211. https://doi.org/10.1016/j.virusres.2016.10.011
  131. Wilcox, K.R., et al., 2017. Asynchrony among local communities stabilises ecosystem function of metacommunities. Ecology Letters, 20(12): p. 1534-1545. https://doi.org/10.1111/ele.12861
  132. Xie, W.M., et al., 2017. Application of terrestrial laser scanner on tidal flat morphology at a typhoon event timescale. Geomorphology, 292: p. 47-58. https://doi.org/10.1016/j.geomorph.2017.04.034
  133. Yu, H.C., et al., 2017. Simulating multi-scale oceanic processes around Taiwan on unstructured grids. Ocean Modelling, 119: p. 72-93. https://doi.org/10.1016/j.ocemod.2017.09.007
  134. Zhang, J.F., et al., 2017. Lattice Boltzmann simulations of oscillating-grid turbulence. Journal of Hydrodynamics, 29(1): p. 68-74. https://doi.org/10.1016/81001-6058(16)60718-7